At a glance
Key takeaways
- Map every employee to the correct industrial instrument and classification.
- Treat time and attendance data as a controlled input.
- Test overtime, penalties, allowances and annualised salaries.
- Reconcile payroll, superannuation and the general ledger.
1. Incorrect award or agreement coverage
Coverage depends on the employer, work performed, classifications and any applicable enterprise agreement. Job title alone is not enough.
Businesses should maintain an employee-level record showing the applicable award or agreement, classification, employment type and the evidence supporting that decision. Reassess when duties materially change.
2. Classification drift
An employee may start at one level and gradually take on higher-skilled duties. If payroll remains tied to the original classification, an underpayment risk can grow quietly.
Promotions, training completion, supervisory duties and changes in equipment or responsibility should trigger a classification review.
3. Incomplete time and attendance data
Missing start and finish times, unpaid pre-start work, meal-break issues and unapproved overtime can all distort pay. A manager approving a total number of hours is not the same as validating when those hours were worked.
Time records should support the calculation of ordinary hours, overtime, weekend work, shift penalties and allowances. Corrections require an audit trail and timely employee communication.
4. Misconfigured payroll rules
Common problems include outdated rates, incorrect casual loading, overlapping penalties, missed allowances and wrong overtime triggers. Test scenarios whenever rates, awards, rosters or payroll systems change.
- Ordinary weekday hours
- Overtime before or after rostered hours
- Saturday, Sunday and public-holiday work
- Shiftwork and permanent-night arrangements
- Allowances, meal breaks and minimum engagements
- Leave taken across different roster patterns
5. Annualised salaries without reconciliation
A salary does not automatically remove award obligations. Some awards contain annualised wage provisions, record-keeping requirements and reconciliation rules. Contractual offset clauses also require careful design and evidence.
Track the hours and entitlements that would otherwise have applied. If the salary does not cover the lawful minimum for the relevant period, the shortfall needs to be addressed.
6. Superannuation and payroll reconciliation gaps
The super guarantee rate is 12%. From 1 July 2026, Payday Super rules require employers to pay superannuation contributions each payday, subject to the detailed rules and exceptions.
Payroll should be reconciled to bank payments, super contributions, PAYG withholding, leave balances and the general ledger. Differences should be investigated rather than rolled forward.
A practical payroll control calendar
Compliance is stronger when checks are assigned and scheduled rather than left to memory.
- Every pay run: exceptions, new starters, terminations and master-data changes
- Monthly: payroll-to-ledger, leave and superannuation reconciliation
- Quarterly: award rates, classifications and allowance testing
- Annually: full employee sample, annualised salary and policy review
- On change: retest after system, roster, award or employment-condition changes
This article is general information, not workplace-relations or legal advice. Award interpretation should be checked against the current instrument and the employee’s circumstances.
Sources & further reading
Primary guidance
- Fair Work Ombudsman: Awards ↗
- Fair Work Ombudsman: Pay and wages ↗
- Fair Work Ombudsman: Tax and superannuation ↗
- Fair Work Ombudsman: Salaried employee record keeping ↗
This publication provides general information only. It does not replace accounting, tax, legal, workplace-relations or other professional advice tailored to your circumstances.
